Tanner Group Publications

Publications - University of Missouri-Columbia

PubMed Search for Tanner-JJ

59. J.P. Schuermann, T.A. White, D. Srivastava, D.B. Karr and J.J. Tanner
Three Crystal Forms of the Bifunctional Enzyme Proline Utilization A (PutA) from Bradyrhizobium japonicum
Acta Crystallogr. Volume F, (2008) in press

58. J.J. Tanner
Review article: Structural biology of proline catabolism
Amino Acids (2008) Mar 28 [Epub ahead of print]
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57. Y. Zhou, J.D. Larson, C.A. Bottoms, E.C. Arturo, M.T. Henzl, J.L. Jenkins, J.C. Nix, D.F. Becker, and J.J. Tanner
Structural Basis of Transcriptional Regulation of the Proline Utilization Regulon by Multifunctional PutA
J. Mol. Biol. (2008) 381(1):174-88.
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56. T.A. White, W.H. Johnson, Jr., C.P. Whitman and J.J. Tanner
Structural basis for the inactivation of Thermus thermophilus proline dehydrogenase by N-propargylglycine
Biochemistry (2008) 47(20):5573-80.
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55. A. Tan, J. J. Tanner and M. T. Henzl
Energetics of OCP1-OCP2 complex formation
Biophys. Chem. (2008) 134(1-2):64-71.
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54. M. T. Henzl and J. J. Tanner
Solution structure of calcium-free rat alpha parvalbumin
Protein Sci. (2008) 17(3):431-8.
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53. Z. Ou, C.A. Bottoms, M.T. Henzl and J. J. Tanner
Impact of DNA Hairpin Folding Energetics on Antibody - ssDNA Association
J. Mol. Biol. (2007) 374, 1029–1040.
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52. R.L. Felts, Z. Ou, T.J. Reilly, and J. J. Tanner
Structure of recombinant Haemophilus influenzae e (P4) acid phosphatase reveals a new member of the haloacid dehalogenase superfamily
Biochemistry (2007) 46 (39), 11110 -11119.
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51. M. T. Henzl and J. J. Tanner
Solution Structure of Ca2+-free Rat β-Parvalbumin (Oncomodulin)
Protein Sci. (2007) Sep;16(9):1914-26.
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50. A.J. DiMauro, D. Lin, S. Guo, D. B. Karr, J. J. Tanner, and P. Guo
Crystallization of Phi29 Spindle-Shaped Nano-Bar Anti-Receptor with Glycosidase Domain
Journal of Nanoscience and Nanotechnology (2007) 7, 1–7.
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49. T.A. White, N. Krishnan, D.F. Becker and J.J. Tanner
Structure and Kinetics of Monofunctional Proline Dehydrogenase from Thermus thermophilus.
J. Biol. Chem. (2007) 282(19):14316-14327.
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48. W. Zhang, M. Zhang, W. Zhu, Y. Zhou, S. Wanduragala, D. Rewinkel, J.J. Tanner and D.F. Becker
Redox-induced changes in flavin structure and roles of the flavin N(5) and the ribityl 2'-OH group in regulating PutA-membrane binding
Biochemistry (2007) 46(2):483-491.
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47. J.D. Larson, J.L. Jenkins, J.P. Schuermann, Y. Zhou, D.F. Becker and John J. Tanner
Crystal structures of the DNA-binding domain of Escherichia coli proline utilization A flavoprotein and analysis of the role of Lys9 in DNA recognition
Protein Sci. (2006), 15:1–12.
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46. R.L. Felts, T.J. Reilly and J.J. Tanner
Sructure of Francisella tularensis ACPA: Prototype of a unique superfamily of acid phosphatases and phospholipases C
J. Biol. Chem. (2006) Oct 6;281(40):30289-98.
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45. R.L. Felts, T.J. Reilly, M.J. Calcutt and J.J. Tanner
Cloning, purification and crystallization of Bacillus anthracis class C acid phosphatase
Acta Crytallographica F (2006) F62:705-8.
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44. C.A. Bottoms, T.A. White and J.J. Tanner
Exploring Structurally Conserved Sovent Sites in Protein Families
Proteins (2006) 64(2):404-421.
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43. M.V. Pattarkine, J.J. Tanner, C.A. Bottoms, Y.-H. Lee and J.D. Wall
Desulfovibrio desulfuricans G20 tetraheme cytochrome structure at 1.5Å and cytochrome interaction with metal complexes
J. Mol. Biol. (2006) 358(5):1314-1327.
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42. Z. Ou, R.L. Felts, T.J. Reilly, J.C. Nix and J.J. Tanner
Crystallization of recombinant Haemophilus influenzae e (P4) acid phosphatase
Acta Crytallographica F (2006) F62, 464-466.
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41. J.L. Jenkins and J.J. Tanner
High Resolution Crystal Structure of Human D Glyceraldehyde-3-Phosphate Dehydrogenase
Acta Crytallographica D (2006) 62(Pt 3):290-301.
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40. R.L. Felts, T.J. Reilly, M.J. Calcutt and J.J. Tanner
Crystallization of a newly discovered histidine acid phosphatase from Francisella tularensis
Acta Crytallographica F (2006) F62, 32-35.
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39. T.J. Reilly, R.L. Felts, M.T. Henzl, M.J. Calcutt and J.J. Tanner
Characterization of recombinant Francisella tularensis acid phosphatase
Prot. Exp. Purif. (2006) 45, 132-141.
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38. White, T. A. & Tanner, J. J.
Cloning, purification and crystallization of Thermus thermophilus proline dehydrogenase.
Acta Crystallogr. (2005) F61, 737-739.
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37. Tanner, J. J., Agah, S., Lee, Y. H. & Henzl, M. T.
Crystal Structure of the D94S/G98E Variant of Rat alpha-Parvalbumin. An Explanation for the Reduced Divalent Ion Affinity.
Biochemistry (2005) 44, 10966-76.
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36. R.L. Felts, T.J. Reilly and J.J. Tanner
Crystallization of AcpA, a respiratory burst-inhibiting acid phosphatase from Francisella tularensis.
Biochim. Biophys. Acta. (2005) 1752, 107-10.
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35. J.P. Schuermann, S.P. Prewitt, C. Davies, S.L. Deutscher, and J. J. Tanner
Evidence for Structural Plasticity of Heavy Chain Complementarity-Determining Region 3 in Antibody-ssDNA Recognition
J. Mol. Biol. (2005) 347(5), 965-78.
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34. M. Zhang, T.A. White, J.P. Schuermann, B.A. Baban, D.F. Becker, and J. J. Tanner
Structures of the Escherichia coli PutA proline dehydrogenase domain in complex with competitive inhibitors.
Biochemistry (2004) 43(39) 12539-48.
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33. B. Baban, M.P. Vinod, J.J. Tanner, and D.F. Becker
Probing a hydrogen bond pair and the FAD redox properties in the proline dehydrogenase domain of Escherichia coli PutA
Biochem. Biophys. Acta (2004) 1701, 49-59.
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32. Y.-H. Lee, J.J. Tanner, J.D. Larson, and M.T. Henzl
Crystal Structure of a High-Affinity Variant of Rat alpha-Parvalbumin
Biochemistry (2004), 43(31):10008-10017.
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31. D. Gu, Y.Zhou, V. Kallhoff, B. Baban, J. J. Tanner, and D. Becker
Identification and Characterization of the DNA-binding Domain of the Multifunctional PutA Flavoenzyme
J. Biol. Chem. (2004), 279(30):31171-31176.
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30. J.P. Schuermann, M.T. Henzl, S.L. Deutscher, and J.J. Tanner
Structure of an anti-DNA Fab complexed with a non-DNA ligand provides insights into cross-reactivity and molecular mimicry.
Proteins (2004) 57, 269-278.
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29. C.A. Bottoms, J.P. Schuermann, S. Agah, M.T. Henzl, and J.J. Tanner
Crystal structure of rat alpha-parvalbumin at 1.05 Angstrom resolution.
Protein Sci. (2004) 13(7):1724-1734 .
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28. M. Zhang and J.J. Tanner
Detection of L-lactate in polyethylene glycol solutions confirms the identity of the active-site ligand in a proline dehydrogenase structure.
Acta Crystallogr. (2004) D60, 985-986.
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27. J.P. Schuermann and J.J. Tanner
MRSAD: using anomalous dispersion from S atoms collected at Cu Kalpha wavelength in molecular-replacement structure determination.
Acta Crystallogr. (2003) D59, 1731-1736.
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26. Y.-H. Lee, S. Nadaraia, D. Gu, D. F. Becker, and J. J. Tanner
Structure of the proline dehydrogenase domain of the multifunctional PutA flavoprotein
Nature Structural Biology (2003) 10, 109-114.
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25. C. A. Bottoms, P. E. Smith, and J. J. Tanner
A structurally conserved water molecule in Rossmann dinucleotide-binding domains
Protein Sci. (2002) 11, 2125-2137.
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24. S. Nadaraia, Y.-H. Lee, D. F. Becker, and J. J. Tanner
Crystallization and Preliminary Crystallographic Analysis of the Proline Dehydrogenase Domain of the Multifunctional PutA Flavoprotein from Escherichia coli
Acta Crystallogr. D Biol Crystallogr. (2001) D57,1925-1927.
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23. J.J. Tanner, A.A. Komissarov, and S.L. Deutscher
Crystal Structure of an Antigen-Binding Fragment Bound to Single-Stranded DNA
J. Mol. Biol. (2001) 314, 807-22.
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22. S. P. Prewitt, A.A. Komissarov, S.L. Deutscher, SL, and J.J. Tanner
Crystallization and Molecular Replacement Studies of a Recombinant Antigen-Binding Fragment Complexed with Single-stranded DNA
Acta Cryst. (2000), D56, 1007-1011.
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21. P.E. Smith and J.J. Tanner, J. J.
Conformations of Nicotinamide Adenine Dinucleotide (NAD+) in Various Environments.
J. Mol. Recognit. (2000)13, 27-34
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20. P.E. Smith and J.J. Tanner
Molecular dynamics simulations of NAD+ in solution.
J. Amer. Chem. Soc. (1999)121, 8637-8644.
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Publications - University of Houston (Postdoctoral Research)

19. J.J. Tanner, S.-C. Tu, L.J. Barbour, C.L. Barnes, & K.L. Krause
Unusual Folded Conformation of NAD+ Bound to Flavin Reductase P.
Protein Science (1999) 8, 1725-1732.

18. J.J. Tanner, M.D. Miller, K.S. Wilson, S.-C. Tu & K.L. Krause
Structure of bacterial luciferase beta2 homodimer: Implications for flavin binding.
Biochemistry (1997) 36, 665.

17. K.L. Krause, M.D. Miller & J.J. Tanner
Crystal structure of flavin reductase P - a dimeric enzyme that provides reduced flavin in Vibrio harveyi.
In Proceedings: Bioluminescence and Chemiluminescence. Molecular reporting with photons.
Eds. J. W. Hastings, L. J. Kricka, & P. E. Stanley. J. Wiley & Sons, Sussex, (1997) p. 42-49.

16. J.J. Tanner
Molecular mechanics
Macmillan Encyclopedia of Chemistry (1997) p. 959, Simon & Schuster Macmillan.

15. J.J. Tanner, B. Lei, S.-C. Tu & K.L. Krause
Flavin reductase P: Structure of a dimeric enzyme that reduces flavin.
Biochemistry (1996) 35, 13531.

14. J.J. Tanner, R.M. Hecht, & K.L. Krause
Determinants of enzyme thermostability observed in the molecular structure of Thermus aquaticusD-glyceraldehyde-3-phosphate dehydrogenase at 2.5 Å resolution.
Biochemistry (1996) 35, 2597.

13. J. Tanner, R. M.Hecht, M.Pisegna, D. M. Seth & K. L. Krause
Preliminary crystallographic analysis of glyceraldehyde 3-phosphate dehydrogenase from the extreme thermophile Thermus aquaticus.
Acta Cryst. (1994) D50, 744.

12. J. Tanner, B. Lei, M. Liu, S.-C. Tu & Krause, K. L.
Crystallization and preliminary crystallographic analysis of NADPH:FMN oxidoreductase from Vibrio harveyi.
J. Mol. Biol. (1994) 241, 283.

11. M. D. Miller, J. Tanner, M. Alpaugh, M. J. Benedik & K. L. Krause
2.1 Å structure of Serratia endonuclease suggests a mechanism for binding to double-stranded DNA.
Nature Struct. Biol. (1994) 1, 461.

10. J. Tanner, & K. L. Krause
A practical approach to data collection using the R-axis II.
The Rigaku Journal (1994) 11, 4.

9. J.J. Tanner, P.E. Smith, & K. L. Krause
Molecular dynamics simulations and rigid body (TLS) analysis of aspartate carbamoyltransferase: Evidence for an uncoupled R state.
Protein Science (1993) 2, 927.

8. J.J. Tanner, L.J. Nell & J.A. McCammon
Anti-insulin antibody structure and conformation. II. Molecular dynamics with explicit solvent.
Biopolymers (1992) 32, 23.

7. T. N. Truong, , J.J. Tanner, P. Bala, J.A. McCammon, D.J. Kouri, B. Lesyng & D. K. Hoffman
A comparative study of time dependent quantum mechanical wave packet evolution methods.
J. Chem. Phys. (1992) 96, 2077.

6. L. Jaroszewski, B.L. Lesyng, J.J. Tanner & J.A. McCammon
Ab Initio study of proton transfer in [H3N-H-NH3]+ and [H3N-H-OH2]+.
Chem. Phys. Letters (1990) 175, 282.

5. J.J. Tanner
A computer-based approach to teaching quantum dynamics.
J. Chem. Ed. (1990) 67, 917.

Publications - Brown University (Dissertation Research)

4. J.J. Tanner & M.M. Maricq
Floquet analysis of the far-infrared dissociation of a Morse oscillator.
Phys. Rev. (1989) A40, 4054.

3. J.J. Tanner & M.M. Maricq
Far IR dissociation of a highly excited Morse oscillator.
Chem. Phys. Letters (1988) 149, 503.

2. J.J. Tanner & M.M. Maricq
The role of rotation in the vibrational relaxation of diatomic molecules.
Chem. Phys. (1988) 119, 307.

1. J.J. Tanner & M.M. Maricq
A modified Landau-Teller model for vibrational relaxation of small molecular ions.
Chem. Phys. Letters (1987) 138, 495.